CSATK Report
May 16, 2017
Produced by
CSATK (version 2.0-170422)
Raw Data
| Sample | Fastq 1 | Fastq 2 | File size | Species |
|---|
| H3K27ac_1 | Ra-Ab4729-1-1_R1.fq | Ra-Ab4729-1-1_R2.fq | 6GB x2 | homo_sapines |
| H3K27ac_2 | Ra-Ab4729-1-2_R1.fq | Ra-Ab4729-1-2_R2.fq | 6GB x2 | homo_sapines |
| H3K27me3_1 | Ra-07-449-3-1_R1.fq | Ra-07-449-3-1_R2.fq | 6GB x2 | homo_sapines |
| H3K27me3_2 | Ra-07-449-3-2_R1.fq | Ra-07-449-3-2_R2.fq | 6GB x2 | homo_sapines |
| H3K4me1_1 | Ra-8895-2-1_R1.fq | Ra-8895-2-1_R2.fq | 6GB x2 | homo_sapines |
| H3K4me1_2 | Ra-8895-2-2_R1.fq | Ra-8895-2-2_R2.fq | 6GB x2 | homo_sapines |
| H3K4me3_1 | Ra-ab8580-5-1_R1.fq | Ra-ab8580-5-1_R2.fq | 7GB x2 | homo_sapines |
| H3K4me3_2 | Ra-ab8580-5-2_R1.fq | Ra-ab8580-5-2_R2.fq | 6GB x2 | homo_sapines |
| H3K9me3_1 | Ra-ab8898-4-1_R1.fq | Ra-ab8898-4-1_R2.fq | 6GB x2 | homo_sapines |
| H3K9me3_2 | Ra-ab8898-4-2_R1.fq | Ra-ab8898-4-2_R2.fq | 6GB x2 | homo_sapines |
| Input | Ra-Input_R1.fq | Ra-Input_R2.fq | 6GB x2 | homo_sapines |
Quality Control
| Sampe Name | Reads length | Total reads | Filtered reads | Ratio |
|---|
| H3K27ac_1 | 150 | 19,958,585 | 18,896,396 | 94.68% |
| H3K27ac_2 | 150 | 18,494,175 | 17,414,758 | 94.16% |
| H3K27me3_1 | 150 | 19,728,818 | 18,848,451 | 95.54% |
| H3K27me3_2 | 150 | 18,271,107 | 17,558,128 | 96.10% |
| H3K4me1_1 | 150 | 20,814,133 | 19,625,384 | 94.29% |
| H3K4me1_2 | 150 | 18,704,255 | 17,680,454 | 94.53% |
| H3K4me3_1 | 150 | 22,942,353 | 21,766,481 | 94.87% |
| H3K4me3_2 | 150 | 19,136,097 | 18,228,094 | 95.26% |
| H3K9me3_1 | 150 | 18,876,050 | 17,895,674 | 94.81% |
| H3K9me3_2 | 150 | 18,189,946 | 17,199,069 | 94.55% |
| Input | 150 | 19,469,489 | 18,582,171 | 95.44% |
Reads Alignment
| Sampe | All reads | Mapped reads | Rmdup reads | Unique reads |
|---|
| H3K27ac_1 | 37,884,284 | 37,145,178 | 34,317,726 | 31,711,600 |
| H3K27ac_2 | 34,918,454 | 34,234,359 | 31,257,177 | 28,893,573 |
| H3K27me3_1 | 37,805,958 | 36,647,950 | 34,725,623 | 31,210,446 |
| H3K27me3_2 | 35,221,677 | 33,761,665 | 32,376,329 | 28,719,393 |
| H3K4me1_1 | 39,360,792 | 38,665,868 | 35,593,893 | 32,919,781 |
| H3K4me1_2 | 35,456,024 | 34,565,200 | 31,935,166 | 29,327,872 |
| H3K4me3_1 | 43,698,024 | 42,004,403 | 39,824,274 | 35,118,924 |
| H3K4me3_2 | 36,585,132 | 35,264,182 | 33,616,147 | 29,781,762 |
| H3K9me3_1 | 35,959,073 | 34,452,438 | 32,845,017 | 28,195,750 |
| H3K9me3_2 | 34,556,063 | 33,294,319 | 31,510,900 | 27,167,457 |
| Input | 37,326,261 | 36,053,254 | 33,979,297 | 30,259,671 |
ChIP Quality
Correlation Analysis
TSS Plot
Peak Calling
| Sample | Peak type | Average Length | Peak Count |
|---|
| H3K27ac_1 | narrow | 444 | 13,409 |
| H3K27ac_2 | narrow | 546 | 33,183 |
| H3K27me3_1 | broad | 1,610 | 9,949 |
| H3K27me3_2 | broad | 1,264 | 7,754 |
| H3K4me1_1 | broad | 1,359 | 16,425 |
| H3K4me1_2 | broad | 1,775 | 30,419 |
| H3K4me3_1 | narrow | 487 | 16,328 |
| H3K4me3_2 | narrow | 509 | 18,161 |
| H3K9me3_1 | broad | 681 | 4,204 |
| H3K9me3_2 | broad | 724 | 4,211 |
| Input | narrow | 309 | 583 |
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Peak Heatmap
| H3K27ac_1 | H3K27ac_2 | H3K27me3_1 | H3K27me3_2 | H3K4me1_1 | H3K4me1_2 | H3K4me3_1 | H3K4me3_2 | H3K9me3_1 | H3K9me3_2 | Input |
|---|---|---|---|---|---|---|---|---|---|---|
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Peak over Chromosome
Peak Annotation
| Sample | Intergenic | exon | promoter-TSS | TTS | intron |
|---|
| H3K27ac_1 | 2,197 | 1,198 | 4,366 | 857 | 4,791 |
| H3K27ac_2 | 6,017 | 2,756 | 9,484 | 2,513 | 12,413 |
| H3K27me3_1 | 4,211 | 466 | 743 | 431 | 4,098 |
| H3K27me3_2 | 3,436 | 294 | 461 | 299 | 3,264 |
| H3K4me1_1 | 3,289 | 1,084 | 2,682 | 1,573 | 7,797 |
| H3K4me1_2 | 6,892 | 1,702 | 4,236 | 2,506 | 15,083 |
| H3K4me3_1 | 691 | 1,858 | 8,785 | 670 | 4,324 |
| H3K4me3_2 | 793 | 2,019 | 9,716 | 750 | 4,883 |
| H3K9me3_1 | 1,978 | 192 | 222 | 190 | 1,622 |
| H3K9me3_2 | 2,006 | 161 | 216 | 201 | 1,627 |
| Input | 385 | 34 | 59 | 19 | 86 |
GO Analysis
| Sample | GO type | Description | Count | Percent |
|---|
| H3K27ac_1 | Biological Process | cellular process (GO:0009987) | 720 | 43.5% |
| H3K27ac_1 | Biological Process | metabolic process (GO:0008152) | 607 | 36.6% |
| H3K27ac_1 | Biological Process | response to stimulus (GO:0050896) | 192 | 11.6% |
| H3K27ac_1 | Biological Process | localization (GO:0051179) | 190 | 11.5% |
| H3K27ac_1 | Biological Process | biological regulation (GO:0065007) | 183 | 11.0% |
| H3K27ac_1 | Biological Process | developmental process (GO:0032502) | 168 | 10.1% |
| H3K27ac_1 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 139 | 8.4% |
| H3K27ac_1 | Biological Process | multicellular organismal process (GO:0032501) | 123 | 7.4% |
| H3K27ac_1 | Biological Process | immune system process (GO:0002376) | 91 | 5.5% |
| H3K27ac_1 | Biological Process | biological adhesion (GO:0022610) | 44 | 2.7% |
| H3K27ac_1 | Biological Process | reproduction (GO:0000003) | 23 | 1.4% |
| H3K27ac_1 | Biological Process | locomotion (GO:0040011) | 18 | 1.1% |
| H3K27ac_1 | Biological Process | rhythmic process (GO:0048511) | 1 | 0.1% |
| H3K27ac_1 | Biological Process | growth (GO:0040007) | 1 | 0.1% |
| H3K27me3_1 | Biological Process | cellular process (GO:0009987) | 315 | 43.3% |
| H3K27me3_1 | Biological Process | metabolic process (GO:0008152) | 210 | 28.8% |
| H3K27me3_1 | Biological Process | multicellular organismal process (GO:0032501) | 132 | 18.1% |
| H3K27me3_1 | Biological Process | developmental process (GO:0032502) | 124 | 17.0% |
| H3K27me3_1 | Biological Process | biological regulation (GO:0065007) | 122 | 16.8% |
| H3K27me3_1 | Biological Process | response to stimulus (GO:0050896) | 109 | 15.0% |
| H3K27me3_1 | Biological Process | localization (GO:0051179) | 86 | 11.8% |
| H3K27me3_1 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 69 | 9.5% |
| H3K27me3_1 | Biological Process | immune system process (GO:0002376) | 60 | 8.2% |
| H3K27me3_1 | Biological Process | biological adhesion (GO:0022610) | 30 | 4.1% |
| H3K27me3_1 | Biological Process | reproduction (GO:0000003) | 26 | 3.6% |
| H3K27me3_1 | Biological Process | locomotion (GO:0040011) | 9 | 1.2% |
| H3K27me3_1 | Biological Process | growth (GO:0040007) | 1 | 0.1% |
| H3K27me3_1 | Biological Process | cell killing (GO:0001906) | 1 | 0.1% |
| H3K27me3_2 | Biological Process | cellular process (GO:0009987) | 269 | 47.0% |
| H3K27me3_2 | Biological Process | metabolic process (GO:0008152) | 165 | 28.8% |
| H3K27me3_2 | Biological Process | developmental process (GO:0032502) | 118 | 20.6% |
| H3K27me3_2 | Biological Process | multicellular organismal process (GO:0032501) | 107 | 18.7% |
| H3K27me3_2 | Biological Process | biological regulation (GO:0065007) | 91 | 15.9% |
| H3K27me3_2 | Biological Process | response to stimulus (GO:0050896) | 81 | 14.2% |
| H3K27me3_2 | Biological Process | localization (GO:0051179) | 70 | 12.2% |
| H3K27me3_2 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 56 | 9.8% |
| H3K27me3_2 | Biological Process | immune system process (GO:0002376) | 50 | 8.7% |
| H3K27me3_2 | Biological Process | reproduction (GO:0000003) | 27 | 4.7% |
| H3K27me3_2 | Biological Process | biological adhesion (GO:0022610) | 27 | 4.7% |
| H3K27me3_2 | Biological Process | locomotion (GO:0040011) | 8 | 1.4% |
| H3K27me3_2 | Biological Process | cell killing (GO:0001906) | 1 | 0.2% |
| H3K4me1_1 | Biological Process | cellular process (GO:0009987) | 817 | 42.8% |
| H3K4me1_1 | Biological Process | metabolic process (GO:0008152) | 649 | 34.0% |
| H3K4me1_1 | Biological Process | response to stimulus (GO:0050896) | 244 | 12.8% |
| H3K4me1_1 | Biological Process | localization (GO:0051179) | 240 | 12.6% |
| H3K4me1_1 | Biological Process | developmental process (GO:0032502) | 229 | 12.0% |
| H3K4me1_1 | Biological Process | biological regulation (GO:0065007) | 225 | 11.8% |
| H3K4me1_1 | Biological Process | multicellular organismal process (GO:0032501) | 172 | 9.0% |
| H3K4me1_1 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 155 | 8.1% |
| H3K4me1_1 | Biological Process | immune system process (GO:0002376) | 144 | 7.5% |
| H3K4me1_1 | Biological Process | biological adhesion (GO:0022610) | 59 | 3.1% |
| H3K4me1_1 | Biological Process | locomotion (GO:0040011) | 28 | 1.5% |
| H3K4me1_1 | Biological Process | reproduction (GO:0000003) | 26 | 1.4% |
| H3K4me1_1 | Biological Process | cell killing (GO:0001906) | 4 | 0.2% |
| H3K4me1_1 | Biological Process | rhythmic process (GO:0048511) | 1 | 0.1% |
| H3K4me1_2 | Biological Process | cellular process (GO:0009987) | 1,416 | 44.0% |
| H3K4me1_2 | Biological Process | metabolic process (GO:0008152) | 1,131 | 35.2% |
| H3K4me1_2 | Biological Process | response to stimulus (GO:0050896) | 387 | 12.0% |
| H3K4me1_2 | Biological Process | developmental process (GO:0032502) | 372 | 11.6% |
| H3K4me1_2 | Biological Process | localization (GO:0051179) | 366 | 11.4% |
| H3K4me1_2 | Biological Process | biological regulation (GO:0065007) | 360 | 11.2% |
| H3K4me1_2 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 296 | 9.2% |
| H3K4me1_2 | Biological Process | multicellular organismal process (GO:0032501) | 255 | 7.9% |
| H3K4me1_2 | Biological Process | immune system process (GO:0002376) | 212 | 6.6% |
| H3K4me1_2 | Biological Process | biological adhesion (GO:0022610) | 100 | 3.1% |
| H3K4me1_2 | Biological Process | reproduction (GO:0000003) | 52 | 1.6% |
| H3K4me1_2 | Biological Process | locomotion (GO:0040011) | 37 | 1.2% |
| H3K4me1_2 | Biological Process | cell killing (GO:0001906) | 5 | 0.2% |
| H3K4me1_2 | Biological Process | rhythmic process (GO:0048511) | 2 | 0.1% |
| H3K4me3_1 | Biological Process | cellular process (GO:0009987) | 1,418 | 44.1% |
| H3K4me3_1 | Biological Process | metabolic process (GO:0008152) | 1,260 | 39.2% |
| H3K4me3_1 | Biological Process | developmental process (GO:0032502) | 354 | 11.0% |
| H3K4me3_1 | Biological Process | response to stimulus (GO:0050896) | 348 | 10.8% |
| H3K4me3_1 | Biological Process | biological regulation (GO:0065007) | 331 | 10.3% |
| H3K4me3_1 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 329 | 10.2% |
| H3K4me3_1 | Biological Process | localization (GO:0051179) | 306 | 9.5% |
| H3K4me3_1 | Biological Process | multicellular organismal process (GO:0032501) | 202 | 6.3% |
| H3K4me3_1 | Biological Process | immune system process (GO:0002376) | 138 | 4.3% |
| H3K4me3_1 | Biological Process | biological adhesion (GO:0022610) | 66 | 2.1% |
| H3K4me3_1 | Biological Process | reproduction (GO:0000003) | 50 | 1.6% |
| H3K4me3_1 | Biological Process | locomotion (GO:0040011) | 24 | 0.7% |
| H3K4me3_1 | Biological Process | growth (GO:0040007) | 3 | 0.1% |
| H3K4me3_1 | Biological Process | cell killing (GO:0001906) | 3 | 0.1% |
| H3K4me3_1 | Biological Process | rhythmic process (GO:0048511) | 2 | 0.1% |
| H3K4me3_2 | Biological Process | cellular process (GO:0009987) | 1,516 | 42.7% |
| H3K4me3_2 | Biological Process | metabolic process (GO:0008152) | 1,387 | 39.1% |
| H3K4me3_2 | Biological Process | developmental process (GO:0032502) | 373 | 10.5% |
| H3K4me3_2 | Biological Process | response to stimulus (GO:0050896) | 366 | 10.3% |
| H3K4me3_2 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 356 | 10.0% |
| H3K4me3_2 | Biological Process | localization (GO:0051179) | 355 | 10.0% |
| H3K4me3_2 | Biological Process | biological regulation (GO:0065007) | 339 | 9.6% |
| H3K4me3_2 | Biological Process | multicellular organismal process (GO:0032501) | 216 | 6.1% |
| H3K4me3_2 | Biological Process | immune system process (GO:0002376) | 142 | 4.0% |
| H3K4me3_2 | Biological Process | biological adhesion (GO:0022610) | 71 | 2.0% |
| H3K4me3_2 | Biological Process | reproduction (GO:0000003) | 62 | 1.7% |
| H3K4me3_2 | Biological Process | locomotion (GO:0040011) | 28 | 0.8% |
| H3K4me3_2 | Biological Process | rhythmic process (GO:0048511) | 3 | 0.1% |
| H3K4me3_2 | Biological Process | growth (GO:0040007) | 3 | 0.1% |
| H3K4me3_2 | Biological Process | cell killing (GO:0001906) | 2 | 0.1% |
| H3K9me3_1 | Biological Process | cellular process (GO:0009987) | 191 | 50.1% |
| H3K9me3_1 | Biological Process | metabolic process (GO:0008152) | 143 | 37.5% |
| H3K9me3_1 | Biological Process | developmental process (GO:0032502) | 51 | 13.4% |
| H3K9me3_1 | Biological Process | localization (GO:0051179) | 43 | 11.3% |
| H3K9me3_1 | Biological Process | multicellular organismal process (GO:0032501) | 40 | 10.5% |
| H3K9me3_1 | Biological Process | response to stimulus (GO:0050896) | 39 | 10.2% |
| H3K9me3_1 | Biological Process | biological regulation (GO:0065007) | 29 | 7.6% |
| H3K9me3_1 | Biological Process | biological adhesion (GO:0022610) | 28 | 7.3% |
| H3K9me3_1 | Biological Process | immune system process (GO:0002376) | 25 | 6.6% |
| H3K9me3_1 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 22 | 5.8% |
| H3K9me3_1 | Biological Process | reproduction (GO:0000003) | 11 | 2.9% |
| H3K9me3_1 | Biological Process | locomotion (GO:0040011) | 2 | 0.5% |
| H3K9me3_2 | Biological Process | cellular process (GO:0009987) | 174 | 47.2% |
| H3K9me3_2 | Biological Process | metabolic process (GO:0008152) | 131 | 35.5% |
| H3K9me3_2 | Biological Process | multicellular organismal process (GO:0032501) | 46 | 12.5% |
| H3K9me3_2 | Biological Process | developmental process (GO:0032502) | 42 | 11.4% |
| H3K9me3_2 | Biological Process | localization (GO:0051179) | 36 | 9.8% |
| H3K9me3_2 | Biological Process | response to stimulus (GO:0050896) | 36 | 9.8% |
| H3K9me3_2 | Biological Process | biological regulation (GO:0065007) | 28 | 7.6% |
| H3K9me3_2 | Biological Process | immune system process (GO:0002376) | 25 | 6.8% |
| H3K9me3_2 | Biological Process | cellular component organization or biogenesis (GO:0071840) | 22 | 6.0% |
| H3K9me3_2 | Biological Process | biological adhesion (GO:0022610) | 17 | 4.6% |
| H3K9me3_2 | Biological Process | reproduction (GO:0000003) | 12 | 3.3% |
| H3K9me3_2 | Biological Process | locomotion (GO:0040011) | 4 | 1.1% |
| H3K9me3_2 | Biological Process | rhythmic process (GO:0048511) | 1 | 0.3% |
| Input | Biological Process | cellular process (GO:0009987) | 23 | 59.0% |
| Input | Biological Process | metabolic process (GO:0008152) | 19 | 48.7% |
| Input | Biological Process | response to stimulus (GO:0050896) | 8 | 20.5% |
| Input | Biological Process | biological regulation (GO:0065007) | 7 | 17.9% |
| Input | Biological Process | multicellular organismal process (GO:0032501) | 7 | 17.9% |
| Input | Biological Process | localization (GO:0051179) | 5 | 12.8% |
| Input | Biological Process | developmental process (GO:0032502) | 5 | 12.8% |
| Input | Biological Process | immune system process (GO:0002376) | 5 | 12.8% |
| Input | Biological Process | biological adhesion (GO:0022610) | 3 | 7.7% |
| Input | Biological Process | cellular component organization or biogenesis (GO:0071840) | 1 | 2.6% |
| Input | Biological Process | reproduction (GO:0000003) | 1 | 2.6% |
| Input | Biological Process | locomotion (GO:0040011) | 1 | 2.6% |
| H3K27ac_1 | Cellular Component | cell part (GO:0044464) | 393 | 23.7% |
| H3K27ac_1 | Cellular Component | organelle (GO:0043226) | 240 | 14.5% |
| H3K27ac_1 | Cellular Component | membrane (GO:0016020) | 134 | 8.1% |
| H3K27ac_1 | Cellular Component | macromolecular complex (GO:0032991) | 121 | 7.3% |
| H3K27ac_1 | Cellular Component | extracellular region (GO:0005576) | 54 | 3.3% |
| H3K27ac_1 | Cellular Component | extracellular matrix (GO:0031012) | 18 | 1.1% |
| H3K27ac_1 | Cellular Component | synapse (GO:0045202) | 4 | 0.2% |
| H3K27ac_1 | Cellular Component | cell junction (GO:0030054) | 4 | 0.2% |
| H3K27me3_1 | Cellular Component | cell part (GO:0044464) | 112 | 15.4% |
| H3K27me3_1 | Cellular Component | membrane (GO:0016020) | 100 | 13.7% |
| H3K27me3_1 | Cellular Component | organelle (GO:0043226) | 77 | 10.6% |
| H3K27me3_1 | Cellular Component | extracellular region (GO:0005576) | 53 | 7.3% |
| H3K27me3_1 | Cellular Component | macromolecular complex (GO:0032991) | 29 | 4.0% |
| H3K27me3_1 | Cellular Component | extracellular matrix (GO:0031012) | 20 | 2.7% |
| H3K27me3_1 | Cellular Component | cell junction (GO:0030054) | 6 | 0.8% |
| H3K27me3_1 | Cellular Component | synapse (GO:0045202) | 4 | 0.5% |
| H3K27me3_2 | Cellular Component | cell part (GO:0044464) | 106 | 18.5% |
| H3K27me3_2 | Cellular Component | membrane (GO:0016020) | 80 | 14.0% |
| H3K27me3_2 | Cellular Component | organelle (GO:0043226) | 73 | 12.8% |
| H3K27me3_2 | Cellular Component | extracellular region (GO:0005576) | 41 | 7.2% |
| H3K27me3_2 | Cellular Component | macromolecular complex (GO:0032991) | 24 | 4.2% |
| H3K27me3_2 | Cellular Component | extracellular matrix (GO:0031012) | 21 | 3.7% |
| H3K27me3_2 | Cellular Component | cell junction (GO:0030054) | 6 | 1.0% |
| H3K27me3_2 | Cellular Component | synapse (GO:0045202) | 3 | 0.5% |
| H3K4me1_1 | Cellular Component | cell part (GO:0044464) | 403 | 21.1% |
| H3K4me1_1 | Cellular Component | organelle (GO:0043226) | 248 | 13.0% |
| H3K4me1_1 | Cellular Component | membrane (GO:0016020) | 211 | 11.1% |
| H3K4me1_1 | Cellular Component | macromolecular complex (GO:0032991) | 102 | 5.3% |
| H3K4me1_1 | Cellular Component | extracellular region (GO:0005576) | 82 | 4.3% |
| H3K4me1_1 | Cellular Component | extracellular matrix (GO:0031012) | 30 | 1.6% |
| H3K4me1_1 | Cellular Component | synapse (GO:0045202) | 9 | 0.5% |
| H3K4me1_1 | Cellular Component | cell junction (GO:0030054) | 9 | 0.5% |
| H3K4me1_2 | Cellular Component | cell part (GO:0044464) | 727 | 22.6% |
| H3K4me1_2 | Cellular Component | organelle (GO:0043226) | 452 | 14.1% |
| H3K4me1_2 | Cellular Component | membrane (GO:0016020) | 317 | 9.9% |
| H3K4me1_2 | Cellular Component | macromolecular complex (GO:0032991) | 215 | 6.7% |
| H3K4me1_2 | Cellular Component | extracellular region (GO:0005576) | 131 | 4.1% |
| H3K4me1_2 | Cellular Component | extracellular matrix (GO:0031012) | 47 | 1.5% |
| H3K4me1_2 | Cellular Component | cell junction (GO:0030054) | 18 | 0.6% |
| H3K4me1_2 | Cellular Component | synapse (GO:0045202) | 6 | 0.2% |
| H3K4me3_1 | Cellular Component | cell part (GO:0044464) | 781 | 24.3% |
| H3K4me3_1 | Cellular Component | organelle (GO:0043226) | 495 | 15.4% |
| H3K4me3_1 | Cellular Component | membrane (GO:0016020) | 271 | 8.4% |
| H3K4me3_1 | Cellular Component | macromolecular complex (GO:0032991) | 245 | 7.6% |
| H3K4me3_1 | Cellular Component | extracellular region (GO:0005576) | 86 | 2.7% |
| H3K4me3_1 | Cellular Component | extracellular matrix (GO:0031012) | 21 | 0.7% |
| H3K4me3_1 | Cellular Component | cell junction (GO:0030054) | 10 | 0.3% |
| H3K4me3_1 | Cellular Component | synapse (GO:0045202) | 8 | 0.2% |
| H3K4me3_2 | Cellular Component | cell part (GO:0044464) | 837 | 23.6% |
| H3K4me3_2 | Cellular Component | organelle (GO:0043226) | 539 | 15.2% |
| H3K4me3_2 | Cellular Component | macromolecular complex (GO:0032991) | 292 | 8.2% |
| H3K4me3_2 | Cellular Component | membrane (GO:0016020) | 276 | 7.8% |
| H3K4me3_2 | Cellular Component | extracellular region (GO:0005576) | 94 | 2.6% |
| H3K4me3_2 | Cellular Component | extracellular matrix (GO:0031012) | 30 | 0.8% |
| H3K4me3_2 | Cellular Component | cell junction (GO:0030054) | 10 | 0.3% |
| H3K4me3_2 | Cellular Component | synapse (GO:0045202) | 9 | 0.3% |
| H3K9me3_1 | Cellular Component | cell part (GO:0044464) | 52 | 13.6% |
| H3K9me3_1 | Cellular Component | organelle (GO:0043226) | 39 | 10.2% |
| H3K9me3_1 | Cellular Component | membrane (GO:0016020) | 27 | 7.1% |
| H3K9me3_1 | Cellular Component | extracellular region (GO:0005576) | 16 | 4.2% |
| H3K9me3_1 | Cellular Component | macromolecular complex (GO:0032991) | 14 | 3.7% |
| H3K9me3_1 | Cellular Component | extracellular matrix (GO:0031012) | 8 | 2.1% |
| H3K9me3_1 | Cellular Component | cell junction (GO:0030054) | 2 | 0.5% |
| H3K9me3_2 | Cellular Component | cell part (GO:0044464) | 59 | 16.0% |
| H3K9me3_2 | Cellular Component | organelle (GO:0043226) | 37 | 10.0% |
| H3K9me3_2 | Cellular Component | membrane (GO:0016020) | 32 | 8.7% |
| H3K9me3_2 | Cellular Component | macromolecular complex (GO:0032991) | 17 | 4.6% |
| H3K9me3_2 | Cellular Component | extracellular region (GO:0005576) | 17 | 4.6% |
| H3K9me3_2 | Cellular Component | extracellular matrix (GO:0031012) | 8 | 2.2% |
| H3K9me3_2 | Cellular Component | cell junction (GO:0030054) | 3 | 0.8% |
| H3K9me3_2 | Cellular Component | synapse (GO:0045202) | 1 | 0.3% |
| Input | Cellular Component | cell part (GO:0044464) | 11 | 28.2% |
| Input | Cellular Component | membrane (GO:0016020) | 7 | 17.9% |
| Input | Cellular Component | organelle (GO:0043226) | 5 | 12.8% |
| Input | Cellular Component | extracellular region (GO:0005576) | 5 | 12.8% |
| Input | Cellular Component | macromolecular complex (GO:0032991) | 3 | 7.7% |
| Input | Cellular Component | extracellular matrix (GO:0031012) | 3 | 7.7% |
| H3K27ac_1 | Molecular Function | binding (GO:0005488) | 502 | 30.3% |
| H3K27ac_1 | Molecular Function | catalytic activity (GO:0003824) | 467 | 28.2% |
| H3K27ac_1 | Molecular Function | transporter activity (GO:0005215) | 74 | 4.5% |
| H3K27ac_1 | Molecular Function | receptor activity (GO:0004872) | 69 | 4.2% |
| H3K27ac_1 | Molecular Function | structural molecule activity (GO:0005198) | 67 | 4.0% |
| H3K27ac_1 | Molecular Function | signal transducer activity (GO:0004871) | 31 | 1.9% |
| H3K27ac_1 | Molecular Function | channel regulator activity (GO:0016247) | 5 | 0.3% |
| H3K27ac_1 | Molecular Function | translation regulator activity (GO:0045182) | 4 | 0.2% |
| H3K27ac_1 | Molecular Function | antioxidant activity (GO:0016209) | 2 | 0.1% |
| H3K27me3_1 | Molecular Function | binding (GO:0005488) | 214 | 29.4% |
| H3K27me3_1 | Molecular Function | catalytic activity (GO:0003824) | 140 | 19.2% |
| H3K27me3_1 | Molecular Function | receptor activity (GO:0004872) | 72 | 9.9% |
| H3K27me3_1 | Molecular Function | transporter activity (GO:0005215) | 66 | 9.1% |
| H3K27me3_1 | Molecular Function | structural molecule activity (GO:0005198) | 50 | 6.9% |
| H3K27me3_1 | Molecular Function | signal transducer activity (GO:0004871) | 29 | 4.0% |
| H3K27me3_1 | Molecular Function | channel regulator activity (GO:0016247) | 5 | 0.7% |
| H3K27me3_1 | Molecular Function | antioxidant activity (GO:0016209) | 1 | 0.1% |
| H3K27me3_2 | Molecular Function | binding (GO:0005488) | 175 | 30.6% |
| H3K27me3_2 | Molecular Function | catalytic activity (GO:0003824) | 106 | 18.5% |
| H3K27me3_2 | Molecular Function | transporter activity (GO:0005215) | 54 | 9.4% |
| H3K27me3_2 | Molecular Function | receptor activity (GO:0004872) | 50 | 8.7% |
| H3K27me3_2 | Molecular Function | structural molecule activity (GO:0005198) | 50 | 8.7% |
| H3K27me3_2 | Molecular Function | signal transducer activity (GO:0004871) | 16 | 2.8% |
| H3K27me3_2 | Molecular Function | channel regulator activity (GO:0016247) | 4 | 0.7% |
| H3K27me3_2 | Molecular Function | antioxidant activity (GO:0016209) | 1 | 0.2% |
| H3K4me1_1 | Molecular Function | binding (GO:0005488) | 551 | 28.9% |
| H3K4me1_1 | Molecular Function | catalytic activity (GO:0003824) | 519 | 27.2% |
| H3K4me1_1 | Molecular Function | receptor activity (GO:0004872) | 126 | 6.6% |
| H3K4me1_1 | Molecular Function | transporter activity (GO:0005215) | 119 | 6.2% |
| H3K4me1_1 | Molecular Function | structural molecule activity (GO:0005198) | 93 | 4.9% |
| H3K4me1_1 | Molecular Function | signal transducer activity (GO:0004871) | 44 | 2.3% |
| H3K4me1_1 | Molecular Function | channel regulator activity (GO:0016247) | 6 | 0.3% |
| H3K4me1_1 | Molecular Function | translation regulator activity (GO:0045182) | 3 | 0.2% |
| H3K4me1_1 | Molecular Function | antioxidant activity (GO:0016209) | 2 | 0.1% |
| H3K4me1_2 | Molecular Function | binding (GO:0005488) | 952 | 29.6% |
| H3K4me1_2 | Molecular Function | catalytic activity (GO:0003824) | 909 | 28.3% |
| H3K4me1_2 | Molecular Function | receptor activity (GO:0004872) | 189 | 5.9% |
| H3K4me1_2 | Molecular Function | transporter activity (GO:0005215) | 169 | 5.3% |
| H3K4me1_2 | Molecular Function | structural molecule activity (GO:0005198) | 164 | 5.1% |
| H3K4me1_2 | Molecular Function | signal transducer activity (GO:0004871) | 67 | 2.1% |
| H3K4me1_2 | Molecular Function | translation regulator activity (GO:0045182) | 12 | 0.4% |
| H3K4me1_2 | Molecular Function | channel regulator activity (GO:0016247) | 5 | 0.2% |
| H3K4me1_2 | Molecular Function | antioxidant activity (GO:0016209) | 5 | 0.2% |
| H3K4me3_1 | Molecular Function | binding (GO:0005488) | 1,023 | 31.8% |
| H3K4me3_1 | Molecular Function | catalytic activity (GO:0003824) | 864 | 26.9% |
| H3K4me3_1 | Molecular Function | transporter activity (GO:0005215) | 141 | 4.4% |
| H3K4me3_1 | Molecular Function | receptor activity (GO:0004872) | 132 | 4.1% |
| H3K4me3_1 | Molecular Function | structural molecule activity (GO:0005198) | 121 | 3.8% |
| H3K4me3_1 | Molecular Function | signal transducer activity (GO:0004871) | 45 | 1.4% |
| H3K4me3_1 | Molecular Function | translation regulator activity (GO:0045182) | 10 | 0.3% |
| H3K4me3_1 | Molecular Function | channel regulator activity (GO:0016247) | 6 | 0.2% |
| H3K4me3_1 | Molecular Function | antioxidant activity (GO:0016209) | 5 | 0.2% |
| H3K4me3_2 | Molecular Function | binding (GO:0005488) | 1,099 | 31.0% |
| H3K4me3_2 | Molecular Function | catalytic activity (GO:0003824) | 934 | 26.3% |
| H3K4me3_2 | Molecular Function | receptor activity (GO:0004872) | 156 | 4.4% |
| H3K4me3_2 | Molecular Function | transporter activity (GO:0005215) | 146 | 4.1% |
| H3K4me3_2 | Molecular Function | structural molecule activity (GO:0005198) | 129 | 3.6% |
| H3K4me3_2 | Molecular Function | signal transducer activity (GO:0004871) | 51 | 1.4% |
| H3K4me3_2 | Molecular Function | translation regulator activity (GO:0045182) | 12 | 0.3% |
| H3K4me3_2 | Molecular Function | channel regulator activity (GO:0016247) | 5 | 0.1% |
| H3K4me3_2 | Molecular Function | antioxidant activity (GO:0016209) | 5 | 0.1% |
| H3K9me3_1 | Molecular Function | binding (GO:0005488) | 152 | 39.9% |
| H3K9me3_1 | Molecular Function | catalytic activity (GO:0003824) | 81 | 21.3% |
| H3K9me3_1 | Molecular Function | receptor activity (GO:0004872) | 30 | 7.9% |
| H3K9me3_1 | Molecular Function | transporter activity (GO:0005215) | 22 | 5.8% |
| H3K9me3_1 | Molecular Function | structural molecule activity (GO:0005198) | 21 | 5.5% |
| H3K9me3_1 | Molecular Function | signal transducer activity (GO:0004871) | 3 | 0.8% |
| H3K9me3_1 | Molecular Function | channel regulator activity (GO:0016247) | 2 | 0.5% |
| H3K9me3_1 | Molecular Function | antioxidant activity (GO:0016209) | 1 | 0.3% |
| H3K9me3_2 | Molecular Function | binding (GO:0005488) | 138 | 37.4% |
| H3K9me3_2 | Molecular Function | catalytic activity (GO:0003824) | 67 | 18.2% |
| H3K9me3_2 | Molecular Function | receptor activity (GO:0004872) | 23 | 6.2% |
| H3K9me3_2 | Molecular Function | structural molecule activity (GO:0005198) | 23 | 6.2% |
| H3K9me3_2 | Molecular Function | transporter activity (GO:0005215) | 16 | 4.3% |
| H3K9me3_2 | Molecular Function | signal transducer activity (GO:0004871) | 8 | 2.2% |
| H3K9me3_2 | Molecular Function | channel regulator activity (GO:0016247) | 1 | 0.3% |
| H3K9me3_2 | Molecular Function | antioxidant activity (GO:0016209) | 1 | 0.3% |
| Input | Molecular Function | binding (GO:0005488) | 17 | 43.6% |
| Input | Molecular Function | catalytic activity (GO:0003824) | 13 | 33.3% |
| Input | Molecular Function | receptor activity (GO:0004872) | 2 | 5.1% |
| Input | Molecular Function | structural molecule activity (GO:0005198) | 2 | 5.1% |
| Input | Molecular Function | transporter activity (GO:0005215) | 2 | 5.1% |
| Input | Molecular Function | signal transducer activity (GO:0004871) | 1 | 2.6% |
| H3K27ac_1 | Pathway | Gonadotropin-releasing hormone receptor pathway (P06664) | 37 | 2.2% |
| H3K27ac_1 | Pathway | Angiogenesis (P00005) | 30 | 1.8% |
| H3K27ac_1 | Pathway | Apoptosis signaling pathway (P00006) | 24 | 1.4% |
| H3K27ac_1 | Pathway | Alzheimer disease-presenilin pathway (P00004) | 12 | 0.7% |
| H3K27ac_1 | Pathway | Alzheimer disease-amyloid secretase pathway (P00003) | 10 | 0.6% |
| H3K27ac_1 | Pathway | Axon guidance mediated by netrin (P00009) | 6 | 0.4% |
| H3K27ac_1 | Pathway | Axon guidance mediated by semaphorins (P00007) | 5 | 0.3% |
| H3K27ac_1 | Pathway | Alpha adrenergic receptor signaling pathway (P00002) | 5 | 0.3% |
| H3K27ac_1 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 3 | 0.2% |
| H3K27ac_1 | Pathway | Adrenaline and noradrenaline biosynthesis (P00001) | 2 | 0.1% |
| H3K27me3_1 | Pathway | Metabotropic glutamate receptor group III pathway (P00039) | 6 | 0.8% |
| H3K27me3_1 | Pathway | Ionotropic glutamate receptor pathway (P00037) | 6 | 0.8% |
| H3K27me3_1 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 4 | 0.5% |
| H3K27me3_1 | Pathway | Axon guidance mediated by netrin (P00009) | 3 | 0.4% |
| H3K27me3_1 | Pathway | Beta2 adrenergic receptor signaling pathway (P04378) | 2 | 0.3% |
| H3K27me3_1 | Pathway | Beta1 adrenergic receptor signaling pathway (P04377) | 2 | 0.3% |
| H3K27me3_1 | Pathway | 5HT4 type receptor mediated signaling pathway (P04376) | 2 | 0.3% |
| H3K27me3_1 | Pathway | Axon guidance mediated by semaphorins (P00007) | 1 | 0.1% |
| H3K27me3_1 | Pathway | De novo pyrimidine deoxyribonucleotide biosynthesis (P02739) | 1 | 0.1% |
| H3K27me3_1 | Pathway | Apoptosis signaling pathway (P00006) | 1 | 0.1% |
| H3K27me3_2 | Pathway | Metabotropic glutamate receptor group III pathway (P00039) | 4 | 0.7% |
| H3K27me3_2 | Pathway | Ionotropic glutamate receptor pathway (P00037) | 4 | 0.7% |
| H3K27me3_2 | Pathway | Beta2 adrenergic receptor signaling pathway (P04378) | 3 | 0.5% |
| H3K27me3_2 | Pathway | Beta1 adrenergic receptor signaling pathway (P04377) | 3 | 0.5% |
| H3K27me3_2 | Pathway | Axon guidance mediated by netrin (P00009) | 1 | 0.2% |
| H3K27me3_2 | Pathway | Beta3 adrenergic receptor signaling pathway (P04379) | 1 | 0.2% |
| H3K27me3_2 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 1 | 0.2% |
| H3K27me3_2 | Pathway | Axon guidance mediated by semaphorins (P00007) | 1 | 0.2% |
| H3K27me3_2 | Pathway | De novo pyrimidine deoxyribonucleotide biosynthesis (P02739) | 1 | 0.2% |
| H3K27me3_2 | Pathway | Apoptosis signaling pathway (P00006) | 1 | 0.2% |
| H3K4me1_1 | Pathway | Gonadotropin-releasing hormone receptor pathway (P06664) | 36 | 1.9% |
| H3K4me1_1 | Pathway | Apoptosis signaling pathway (P00006) | 27 | 1.4% |
| H3K4me1_1 | Pathway | Angiogenesis (P00005) | 25 | 1.3% |
| H3K4me1_1 | Pathway | Axon guidance mediated by netrin (P00009) | 5 | 0.3% |
| H3K4me1_1 | Pathway | Axon guidance mediated by semaphorins (P00007) | 5 | 0.3% |
| H3K4me1_1 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 2 | 0.1% |
| H3K4me1_1 | Pathway | MYO signaling pathway (P06215) | 1 | 0.1% |
| H3K4me1_1 | Pathway | BMP/activin signaling pathway-drosophila (P06211) | 1 | 0.1% |
| H3K4me1_1 | Pathway | Activin beta signaling pathway (P06210) | 1 | 0.1% |
| H3K4me1_1 | Pathway | Pyridoxal-5-phosphate biosynthesis (P02759) | 1 | 0.1% |
| H3K4me1_2 | Pathway | Gonadotropin-releasing hormone receptor pathway (P06664) | 54 | 1.7% |
| H3K4me1_2 | Pathway | Angiogenesis (P00005) | 53 | 1.6% |
| H3K4me1_2 | Pathway | Apoptosis signaling pathway (P00006) | 36 | 1.1% |
| H3K4me1_2 | Pathway | Axon guidance mediated by netrin (P00009) | 17 | 0.5% |
| H3K4me1_2 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 7 | 0.2% |
| H3K4me1_2 | Pathway | Axon guidance mediated by semaphorins (P00007) | 7 | 0.2% |
| H3K4me1_2 | Pathway | MYO signaling pathway (P06215) | 1 | 0.0% |
| H3K4me1_2 | Pathway | BMP/activin signaling pathway-drosophila (P06211) | 1 | 0.0% |
| H3K4me1_2 | Pathway | Activin beta signaling pathway (P06210) | 1 | 0.0% |
| H3K4me1_2 | Pathway | Ornithine degradation (P02758) | 1 | 0.0% |
| H3K4me3_1 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 7 | 0.2% |
| H3K4me3_1 | Pathway | Axon guidance mediated by netrin (P00009) | 6 | 0.2% |
| H3K4me3_1 | Pathway | Axon guidance mediated by semaphorins (P00007) | 3 | 0.1% |
| H3K4me3_1 | Pathway | MYO signaling pathway (P06215) | 2 | 0.1% |
| H3K4me3_1 | Pathway | BMP/activin signaling pathway-drosophila (P06211) | 2 | 0.1% |
| H3K4me3_1 | Pathway | Activin beta signaling pathway (P06210) | 2 | 0.1% |
| H3K4me3_1 | Pathway | SCW signaling pathway (P06216) | 1 | 0.0% |
| H3K4me3_1 | Pathway | GBB signaling pathway (P06214) | 1 | 0.0% |
| H3K4me3_1 | Pathway | DPP signaling pathway (P06213) | 1 | 0.0% |
| H3K4me3_1 | Pathway | DPP-SCW signaling pathway (P06212) | 1 | 0.0% |
| H3K4me3_2 | Pathway | Axon guidance mediated by netrin (P00009) | 8 | 0.2% |
| H3K4me3_2 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 6 | 0.2% |
| H3K4me3_2 | Pathway | Axon guidance mediated by semaphorins (P00007) | 3 | 0.1% |
| H3K4me3_2 | Pathway | MYO signaling pathway (P06215) | 2 | 0.1% |
| H3K4me3_2 | Pathway | BMP/activin signaling pathway-drosophila (P06211) | 2 | 0.1% |
| H3K4me3_2 | Pathway | Activin beta signaling pathway (P06210) | 2 | 0.1% |
| H3K4me3_2 | Pathway | SCW signaling pathway (P06216) | 1 | 0.0% |
| H3K4me3_2 | Pathway | GBB signaling pathway (P06214) | 1 | 0.0% |
| H3K4me3_2 | Pathway | DPP signaling pathway (P06213) | 1 | 0.0% |
| H3K4me3_2 | Pathway | DPP-SCW signaling pathway (P06212) | 1 | 0.0% |
| H3K9me3_1 | Pathway | Metabotropic glutamate receptor group III pathway (P00039) | 8 | 2.1% |
| H3K9me3_1 | Pathway | Ionotropic glutamate receptor pathway (P00037) | 6 | 1.6% |
| H3K9me3_1 | Pathway | Angiogenesis (P00005) | 5 | 1.3% |
| H3K9me3_1 | Pathway | Axon guidance mediated by netrin (P00009) | 2 | 0.5% |
| H3K9me3_1 | Pathway | Beta3 adrenergic receptor signaling pathway (P04379) | 2 | 0.5% |
| H3K9me3_1 | Pathway | Axon guidance mediated by Slit/Robo (P00008) | 2 | 0.5% |
| H3K9me3_1 | Pathway | Beta2 adrenergic receptor signaling pathway (P04378) | 2 | 0.5% |
| H3K9me3_1 | Pathway | Beta1 adrenergic receptor signaling pathway (P04377) | 2 | 0.5% |
| H3K9me3_1 | Pathway | Apoptosis signaling pathway (P00006) | 2 | 0.5% |
| H3K9me3_1 | Pathway | 5HT4 type receptor mediated signaling pathway (P04376) | 2 | 0.5% |
| H3K9me3_2 | Pathway | Metabotropic glutamate receptor group III pathway (P00039) | 7 | 1.9% |
| H3K9me3_2 | Pathway | Ionotropic glutamate receptor pathway (P00037) | 4 | 1.1% |
| H3K9me3_2 | Pathway | Angiogenesis (P00005) | 3 | 0.8% |
| H3K9me3_2 | Pathway | Axon guidance mediated by netrin (P00009) | 2 | 0.5% |
| H3K9me3_2 | Pathway | Beta2 adrenergic receptor signaling pathway (P04378) | 2 | 0.5% |
| H3K9me3_2 | Pathway | Beta1 adrenergic receptor signaling pathway (P04377) | 2 | 0.5% |
| H3K9me3_2 | Pathway | Apoptosis signaling pathway (P00006) | 2 | 0.5% |
| H3K9me3_2 | Pathway | Interleukin signaling pathway (P00036) | 2 | 0.5% |
| H3K9me3_2 | Pathway | Beta3 adrenergic receptor signaling pathway (P04379) | 1 | 0.3% |
| H3K9me3_2 | Pathway | 5HT4 type receptor mediated signaling pathway (P04376) | 1 | 0.3% |
| Input | Pathway | Apoptosis signaling pathway (P00006) | 3 | 7.7% |
| Input | Pathway | Inflammation mediated by chemokine and cytokine signaling pathway (P00031) | 2 | 5.1% |
| Input | Pathway | Metabotropic glutamate receptor group III pathway (P00039) | 1 | 2.6% |
| Input | Pathway | JAK/STAT signaling pathway (P00038) | 1 | 2.6% |
| Input | Pathway | Angiogenesis (P00005) | 1 | 2.6% |
| Input | Pathway | 5HT2 type receptor mediated signaling pathway (P04374) | 1 | 2.6% |
| Input | Pathway | Alzheimer disease-amyloid secretase pathway (P00003) | 1 | 2.6% |
| Input | Pathway | Interferon-gamma signaling pathway (P00035) | 1 | 2.6% |
| Input | Pathway | Alpha adrenergic receptor signaling pathway (P00002) | 1 | 2.6% |
| Input | Pathway | GABA-B receptor II signaling (P05731) | 1 | 2.6% |
Motif Analysis
| Sample | Motif 1 | Motif 2 | Motif 3 | Motif 4 | Motif 5 |
|---|
| H3K27ac_1 |  |
 |
 |
 |
 |
| H3K27ac_2 |  |
 |
 |
 |
 |
| H3K27me3_1 |  |
 |
 |
 |
 |
| H3K27me3_2 |  |
 |
 |
 |
 |
| H3K4me1_1 |  |
 |
 |
 |
 |
| H3K4me1_2 |  |
 |
 |
 |
 |
| H3K4me3_1 |  |
 |
 |
 |
 |
| H3K4me3_2 |  |
 |
 |
 |
 |
| H3K9me3_1 |  |
 |
 |
 |
 |
| H3K9me3_2 |  |
 |
 |
 |
 |
| Input |  |
 |
 |
 |
 |